Elias Wils
Doctoral fellow – IBiTech-BioMMedA research group, Faculty of Engineering and Architecture - UGent
Principal investigator: prof. An Ghysels (PhD)
Research focus
My research involves the improvement and development of molecular dynamics simulation strategies to perform computational experiments on biophysical processes. This allows to achieve insights with atomic resolution on these processes, such as membrane permeation or a drug molecule binding to a protein. The processes we focus on are those of (cancer) drug molecules that reach a target, such as a protein binding site or the interior of a cell, where we usually want to compute the drug residence time or the permeation rate constant.
A significant challenge of these processes is the vast difference between timescales, which makes our computational experiments extremely demanding. My simulations are therefore based on the path sampling methodology, as it makes use of Metropolis Monte Carlo sampling in path space to discover and analyze rare events in these complex biological systems. Moreover, path sampling allows studying the exact kinetics of the processes we are simulating.
The central goal of my research is further developing the path sampling methodology to evaluate the kinetics and efficacy of certain drug molecules using molecular dynamics simulations and contribute to the field of (cancer) drug discovery in this way.
Biography
I received the degree of Master of Science in Mathematical Engineering in July 2023 at KU Leuven, Belgium. After successfully completing my master’s thesis featuring the development of an acquisition protocol for diffusion MRI, my interest for biomedical research was further ignited. This lead me to pursue a PhD degree at Ghent University to apply my mathematical background to the field of molecular simulations regarding biological systems.
Contact & links
- Lab address: Campus Ghent University Hospital (UZ Gent), The Core, entrance 37, DP 338, Corneel Heymanslaan 10, Ghent
- BioMMedA
- ORCID
- Elias Wils is interested to receive invitations for presentations or talks