prof. Jo Vandesompele (PhD)
- Principal investigator - Lab for functional cancer genomics and applied bioinformatics, Center for Medical Genetics (UGent)
- Full professor (Faculty of Medicine and Health Sciences, UGent)
- Co-founder pxlence
- Co-founder and Chief Scientific Officer at Biogazelle
Research focus
The lab’s research aims to exploit RNA for diagnostic and therapeutic purposes. The various research lines converge on studying the role of non-coding RNA (long non-coding RNA and circular RNA) in cancer and on the utility of extracellular RNA in liquid biopsies. Apart from providing novel fundamental insights, the research also results in putative clinical applications. Through a combination of high-throughput (functional) genomics technologies and bio-informatics tools, we seek to answer various fundamental and translational research questions.
Biography
Jo Vandesompele obtained a Master of Science in Bioscience Engineering (1997) and a PhD in Medical Genetics (2002). Since 2007, he is professor in Functional Cancer Genomics and Applied Bioinformatics at Ghent University. He is author of more than 250 scientific articles in international journals, including some pioneering publications in the domain of RNA quantification and non-coding RNA. His H-index is 66, with over 33,000 citations (Web of Science, January 2020). Jo is a frequently invited speaker at international conferences and symposia. Jo was one of the CRIG co-founders and chairman of the first steering committee (2016-2019).
Research team
- dr. Steve Lefever (PhD), post-doctoral fellow
- dr. Pieter-Jan Volders (PhD), post-doctoral fellow (50% prof. Lennart Martens lab)
- dr. Hetty H. Helsmoortel (PhD), post-doctoral fellow
- prof. Tom Van Maerken (PhD), post-doctoral fellow
- dr. Anneleen Decock (PhD), post-doctoral fellow
- Celine Everaert, doctoral fellow (promotor prof. Pieter Mestdagh)
- Shanna De Waele, doctoral fellow (promotor prof. Pieter Mestdagh)
- Lucia Lorenzi, doctoral fellow (promotor prof. Pieter Mestdagh)
- Joeri Tulkens, doctoral fellow (co-promotor prof. An Hendrix)
- Jill Deleu, doctoral fellow (promotors dr. Bram De Wilde, prof. Tom Van Maerken)
- Kathleen Schoofs - doctoral fellow (promotor prof. Katleen De Preter and prof. Piet Pattyn)
- Marieke Vromman - doctoral fellow (promotor dr. Pieter-Jan Volders)
- Annelien Morlion - doctoral fellow (promotor prof. Pieter Mestdagh)
- Jasper Verwilt - doctoral fellow (co-promotor prof. Pieter Mestdagh)
- Nurten Yigit, technician
- Kimberly Verniers, technician
- Justine Nuytens, technician
- Jasper Anckaert, bioinformatician
- Eveline Vanden Eynde, technician
Key publications
- Unequivocal delineation of clinicogenetic subgroups and development of a new model for improved outcome prediction in neuroblastoma. Journal of Clinical Oncology, 2005
- Antitumor activity of the selective MDM2 antagonist nutlin-3 in a chemoresistant model of neuroblastoma. Journal of the Nat Cancer Institute, 2009
- Predicting outcomes for children with neuroblastoma using a multigene-expression signature: a retrospective SIOPEN/COG/GPOH study. Lancet Oncology, 2009
- The miR-17-92 microRNA cluster regulates multiple components of the TGF-beta pathway in neuroblastoma. Molecular Cell, 2010
- miRNA expression profiling enables risk stratification in archived and fresh neuroblastoma tumor samples. Clinical Cancer Research, 2011
- Melanoma addiction to the long noncoding RNA SAMMSON. Nature, 2016
- Circulating microRNA biomarkers for metastatic disease in neuroblastoma patients. JCI Insight, 2018
Contact & links
- postal and laboratory address: Medical Research Building 1 (MRB1) (entrance 34)
- office address: Blok B, ground floor, room 100.017 (entrance 36), campus UZ Gent, Corneel Heymanslaan 10, 9000 Ghent, Belgium
- Vandesompele lab
- Google Scholar
- Publons